CUE is a text file that describes how tracks are arranged in a super-audio CD and DVDs. Typically, CUE sheets come in plain text and have a filename extension of .cue. Today, this format is prevalent in most media players and optical disc authoring apps.
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MKA is a free Matroska Multimedia Container format that can store multiple audio, video, image, and subtitle tracks. It’s used to save typical multimedia content such as TV shows and movies and comes with a .mkv for video files. When used on audio files, it features a .mka filename extension, .mks for subtitles, and .mk3d for stereoscopic video files.